There are several different GPS-alternatives being researched across the DoD and civilian sectors to address a GPS alternative; however, each alternative comes with additional costs and use cases. Magnetic Navigation presents an alternative GPS system that relies on magnetic resonance of the Earth – a system that is largely known and unchanging – to navigate. Some of the current problems with magnetic navigation involve 1) reducing excess noise on the system, such as magnetic outputs from the Aircraft itself, 2) determining position at a real-time pace or speeds consistent with military systems, and 3) combining with other systems to present a full-alternative GPS system. The present project looks into using robust neural differential models to solve magnetic navigation shortcomings and provide a viable alternative to GPS.